STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ13065.1RNA-directed DNA polymerase (Reverse transcriptase); PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase); COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR003615:IPR000477:IPR013597:IPR002711; KEGG: ana:alr7241 hypothetical protein; PFAM: Reverse transcriptase; Group II intron, maturase-specific; HNH endonuclease; SMART: HNH nuclease; SPTR: Putative uncharacterized protein. (525 aa)    
Predicted Functional Partners:
AFZ13064.1
Hypothetical protein.
       0.541
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.