STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ13439.1PFAM: Mu transposase, C-terminal; Integrase core domain; InterPro IPR001584:IPR015378; KEGG: ava:Ava_1150 integrase catalytic subunit; PFAM: Transposase-like, Mu, C-terminal; Integrase, catalytic core; SPTR: Integrase, catalytic region. (553 aa)    
Predicted Functional Partners:
AFZ13440.1
PFAM: Bacterial TniB protein; COGs: COG2842 Uncharacterized ATPase putative transposase; InterPro IPR008868; KEGG: cyt:cce_3792 hypothetical protein; PFAM: Bacterial TniB; SPTR: Putative uncharacterized protein.
 
 
 0.987
AFZ13441.1
KEGG: ava:Ava_1152 hypothetical protein; SPTR: Putative uncharacterized protein.
   
   0.853
AFZ14162.1
KEGG: ana:all1168 hypothetical protein; SPTR: All1168 protein.
  
     0.700
AFZ12540.1
KEGG: ana:alr3304 hypothetical protein; SPTR: Alr3304 protein.
  
     0.657
AFZ11372.1
KEGG: ava:Ava_2175 mobilization protein MobD-like; SPTR: Putative uncharacterized protein.
  
     0.625
AFZ15272.1
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: cyt:cce_3799 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative uncharacterized protein.
  
     0.580
AFZ11257.1
KEGG: npu:Npun_R5339 Tn7-like transposition protein C; SPTR: Tn7-like transposition protein C.
 
 
 0.536
AFZ11596.1
KEGG: npu:Npun_R5339 Tn7-like transposition protein C; SPTR: Tn7-like transposition protein C.
 
 
 0.536
AFZ13629.1
Hypothetical protein; PFAM: Polysaccharide pyruvyl transferase; COGs: COG2327 conserved hypothetical protein; KEGG: cyt:cce_2095 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.437
AFZ13222.1
PFAM: Dynamin family; Tellurite resistance protein TerB; InterPro IPR001401; KEGG: npu:Npun_F0558 dynamin family protein; PFAM: Dynamin, GTPase domain; SPTR: Dynamin family protein.
  
     0.434
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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