STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ13720.1PFAM: Protein of unknown function (DUF1611); COGs: COG3367 conserved hypothetical protein; InterPro IPR011669; KEGG: npu:Npun_R6603 hypothetical protein; PFAM: Protein of unknown function DUF1611; SPTR: Putative uncharacterized protein. (349 aa)    
Predicted Functional Partners:
AFZ13721.1
PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342:IPR013341; KEGG: ava:Ava_3512 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Mandelate racemase/muconate lactonizing enzyme.
     0.953
AFZ12557.1
KEGG: ana:all3461 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.483
AFZ13990.1
KEGG: ana:asl3523 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.476
cpcT
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.417
AFZ14443.1
PFAM: Protein of unknown function (DUF3352); KEGG: cyc:PCC7424_1390 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.400
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.