STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ13722.1KEGG: ava:Ava_3751 hypothetical protein; SPTR: Putative uncharacterized protein. (100 aa)    
Predicted Functional Partners:
AFZ11205.1
PFAM: Transcriptional regulator PadR-like family; InterPro IPR005149; KEGG: npu:Npun_R4031 PadR-like family transcriptional regulator; PFAM: Transcription regulator PadR N-terminal-like; SPTR: Transcriptional regulator, PadR family, putative.
  
     0.720
AFZ13464.1
Protein of unknown function DUF218; PFAM: DUF218 domain; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: cyt:cce_2516 hypothetical protein; PFAM: Domain of unknown function DUF218; SPTR: Putative uncharacterized protein.
  
     0.675
AFZ11111.1
Helix-turn-helix domain protein; PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: npu:Npun_F3731 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein.
  
     0.668
AFZ12312.1
KEGG: npu:Npun_F3852 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.652
AFZ15399.1
KEGG: mar:MAE_19260 hypothetical protein; SPTR: Similar to tr|Q8YRA6|Q8YRA6.
  
     0.642
AFZ14725.1
KEGG: npu:Npun_R4248 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.633
AFZ11716.1
PFAM: Orange carotenoid protein, N-terminal; InterPro IPR015233; KEGG: ana:alr4783 hypothetical protein; PFAM: Orange carotenoid-binding protein, N-terminal; SPTR: Alr4783 protein.
  
     0.614
AFZ11183.1
PFAM: Protein of unknown function (DUF3352); KEGG: npu:Npun_F5954 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.585
AFZ12390.1
Hypothetical protein; PFAM: YCII-related domain; KEGG: ana:asl1165 hypothetical protein; SPTR: Asl1165 protein.
  
     0.577
cpcT
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.562
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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