STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ14384.1KEGG: zpr:ZPR_1672 hypothetical protein; SPTR: Putative uncharacterized protein. (245 aa)    
Predicted Functional Partners:
AFZ14383.1
KEGG: cpi:Cpin_0630 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    
0.806
AFZ11660.1
PFAM: NmrA-like family; InterPro IPR008030; KEGG: sli:Slin_5373 NmrA family protein; SPTR: NmrA family protein.
  
     0.610
AFZ15198.1
acyl-ACP reductase; PFAM: Shikimate / quinate 5-dehydrogenase; COGs: COG5322 dehydrogenase; InterPro IPR002198; KEGG: naz:Aazo_3370 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR.
   
 
 0.431
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.