STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ14547.1PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: npu:Npun_R0657 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Transporter, major facilitator family; manually curated. (424 aa)    
Predicted Functional Partners:
AFZ13591.1
PFAM: Bacterial SH3 domain; KEGG: cyj:Cyan7822_2077 SH3 type 3 domain-containing protein; SPTR: Bacterial SH3 domain family.
  
     0.582
AFZ14548.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: npu:Npun_R0658 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family protein.
       0.559
AFZ14669.1
KEGG: ana:alr2346 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.524
AFZ14233.1
KEGG: ava:Ava_0577 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.514
moaC
Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
       0.472
AFZ12486.1
Amino acid adenylation domain protein; PFAM: Male sterility protein; Phosphopantetheine attachment site; Methyltransferase domain; AMP-binding enzyme; Condensation domain; PilZ domain; TIGRFAM: amino acid adenylation domain; thioester reductase domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR020806:IPR000873:IPR013217:IPR006163:IPR 001242:IPR009875:IPR013120:IPR010071:IPR010080; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Methyltransferase type 12; Phosphopantetheine-binding [...]
     
 0.466
AFZ12312.1
KEGG: npu:Npun_F3852 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.436
AFZ14860.1
KEGG: npu:Npun_R0500 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.433
AFZ14549.1
NLP/P60 protein; PFAM: NlpC/P60 family; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: ava:Ava_3396 NLP/P60; PFAM: NLP/P60; SPTR: NlpC/P60 family protein.
       0.429
sbcD
Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
     0.412
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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