STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ15013.1KEGG: npu:Npun_F0152 hypothetical protein; SPTR: Putative uncharacterized protein. (152 aa)    
Predicted Functional Partners:
AFZ14337.1
KEGG: cyn:Cyan7425_1403 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.529
AFZ15321.1
CsbD family protein; PFAM: CsbD-like; InterPro IPR008462; KEGG: ava:Ava_4678 CsbD-like; PFAM: CsbD-like; SPTR: CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
    0.529
AFZ15014.1
KEGG: npu:Npun_F0152 hypothetical protein; SPTR: Putative uncharacterized protein.
      
0.452
AFZ15012.1
Multi-sensor signal transduction histidine kinase; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; COGs: COG5002 Signal transduction histidine kinase; InterProIPR001789:IPR000014:IPR001610:IPR003018:IPR 003661:IPR003594:IPR013767:IPR013656; KEGG: cyj:Cyan7822_4408 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulat [...]
       0.415
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.