STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ15142.1PFAM: Ribonuclease BN-like family; COGs: COG1295 membrane protein; InterPro IPR017039:IPR004664; KEGG: ava:Ava_3115 ribonuclease BN; PFAM: Ribonuclease BN-related; SPTR: Ribonuclease BN; TIGRFAM: Ribonuclease BN. (302 aa)    
Predicted Functional Partners:
AFZ15140.1
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: ava:Ava_3113 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold protein.
 
     0.669
AFZ15141.1
KEGG: ter:Tery_1305 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.618
AFZ15143.1
KEGG: ava:Ava_3116 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.554
AFZ15139.1
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: ava:Ava_4708 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold protein.
       0.549
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.