STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AFZ15380.1CopG-like domain-containing DNA-binding domain; PFAM: Ribbon-helix-helix protein, copG family; InterPro IPR002145; KEGG: cyj:Cyan7822_2866 CopG domain-containing protein DNA-binding domain-containing protein; PFAM: CopG-like DNA-binding; SPTR: CopG domain protein DNA-binding domain protein. (51 aa)    
Predicted Functional Partners:
AFZ15381.1
Transposase, IS605 OrfB family; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: ava:Ava_B0100 IS891/IS1136/IS1341 transposase; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal; SPTR: Transposase, IS891/IS1136/IS1341; TIGRFAM: Transposase, IS605 OrfB, C-terminal.
       0.560
AFZ15379.1
Multi-sensor signal transduction histidine kinase; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Phytochrome region; His Kinase A (phosphoacceptor) domain; PAS fold; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR003018:IPR003661:IPR003594:IPR013654:IPR 013515; KEGG: ava:Ava_1003 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-2; GAF; Phytochrome, central region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART [...]
       0.529
AFZ15377.1
Multi-sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014:IPR001789:IPR003661:IPR003594; KEGG: npu:Npun_F1185 multi-sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal [...]
       0.526
AFZ15378.1
PFAM: Response regulator receiver domain; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: ava:Ava_1004 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator receiver domain protein (CheY).
       0.526
AFZ15376.1
PFAM: Protein of unknown function (DUF423); COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: ana:alr3204 hypothetical protein; PFAM: Protein of unknown function DUF423; SPTR: Putative uncharacterized protein.
       0.503
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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