STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ15423.1PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR011662:IPR005644:IPR004846; KEGG: amr:AM1_1398 secretion system protein; PFAM: Type II/III secretion system; Secretin/TonB, short N-terminal; NolW-like; SPTR: Bacterial type II and III secretion system protein. (695 aa)    
Predicted Functional Partners:
AFZ15426.1
PFAM: Competence protein A; COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883:IPR003494; KEGG: cyj:Cyan7822_0038 type IV pilus assembly protein PilM; SMART: Cell division protein FtsA domain; SPTR: Type IV pilus assembly protein PilM; TIGRFAM: Type IV pilus assembly protein PilM.
 
  
 0.792
AFZ13196.1
KEGG: npu:Npun_F0815 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.744
AFZ12550.1
PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: npu:Npun_R2885 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein.
  
  
 0.703
AFZ15424.1
KEGG: mar:MAE_09730 type IV pilus assembly protein; SPTR: Putative uncharacterized protein.
 
   
 0.696
AFZ12300.1
PFAM: Protein of unknown function (DUF3084); COGs: COG4372 Uncharacterized protein with the myosin-like domain; KEGG: npu:Npun_F5512 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.693
AFZ14037.1
PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: ava:Ava_1637 permease YjgP/YjgQ; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Permease YjgP/YjgQ.
  
    0.671
AFZ12611.1
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: npu:Npun_R4574 carbohydrate-selective porin OprB; PFAM: Carbohydrate-selective porin OprB; S-layer homology domain; SPTR: Carbohydrate-selective porin, OprB family; TC 1.B.23; Belongs to the OprB family.
  
     0.666
AFZ13389.1
PFAM: Surface antigen variable number repeat; Surface antigen; POTRA domain, ShlB-type; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: npu:Npun_F1455 surface antigen (D15); PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Outer membrane protein, OMP85 family, putative.
  
     0.643
AFZ14788.1
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: ava:Ava_4059 S-layer region-like; PFAM: Carbohydrate-selective porin OprB; S-layer homology domain; SPTR: Carbohydrate-selective porin, OprB family; TC 1.B.23; Belongs to the OprB family.
  
     0.634
AFZ12073.1
PFAM: Surface antigen variable number repeat; Surface antigen; POTRA domain, ShlB-type; TIGRFAM: chloroplast envelope protein translocase, IAP75 family; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: ava:Ava_0094 surface antigen variable number; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Outer membrane protein, OMP85 family, putative.
  
     0.633
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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