STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY67005.1KEGG: npu:Npun_R5777 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (505 aa)    
Predicted Functional Partners:
AFY67467.1
PFAM: Protein of unknown function (DUF3120); KEGG: ter:Tery_4797 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
AFY67491.1
KEGG: ava:Ava_0350 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.757
AFY66053.1
KEGG: npu:Npun_R1718 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.742
AFY67251.1
KEGG: npu:Npun_F0167 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.741
AFY65551.1
KEGG: ana:alr1674 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.736
AFY67563.1
KEGG: ava:Ava_1979 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.731
AFY67864.1
PFAM: Bacterial SH3 domain; KEGG: npu:Npun_R1579 SH3 type 3 domain-containing protein; SPTR: Bacterial SH3 domain family.
  
     0.731
AFY66866.1
KEGG: cyn:Cyan7425_3343 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.715
AFY66916.1
COGs: COG4222 conserved hypothetical protein; KEGG: cyn:Cyan7425_4386 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.710
AFY65374.1
PFAM: UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016:IPR014017:IPR000212; KEGG: cyn:Cyan7425_4621 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: UvrD/REP helicase domain protein.
 
     0.705
Your Current Organism:
Geitlerinema sp. PCC7407
NCBI taxonomy Id: 1173025
Other names: G. sp. PCC 7407, Geitlerinema sp. ATCC 29126, Geitlerinema sp. CPCC 99, Geitlerinema sp. PCC 7407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.