STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ29217.1Hypothetical protein; PFAM: HNH endonuclease; KEGG: cyt:cce_4918 hypothetical protein; SPTR: Restriction endonuclease. (149 aa)    
Predicted Functional Partners:
AFZ29218.1
Hypothetical protein; KEGG: sms:SMDSEM_033 methionyl-tRNA synthetase; SPTR: Methionyl-tRNA synthetase.
       0.786
AFZ29219.1
KEGG: cyt:cce_4916 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.655
AFZ29220.1
TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.428
Your Current Organism:
Gloeocapsa sp. PCC7428
NCBI taxonomy Id: 1173026
Other names: Chroococcus sp. Cey un, G. sp. PCC 7428, Gloeocapsa sp. ATCC 29159, Gloeocapsa sp. PCC 7428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.