STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ30078.1PFAM: Alpha/beta hydrolase of unknown function (DUF1400); COGs: COG4188 dienelactone hydrolase; InterPro IPR010802; KEGG: cyc:PCC7424_4384 protein of unknown function DUF1400; PFAM: Protein of unknown function DUF1400, cynaobacterial; SPTR: Putative uncharacterized protein. (577 aa)    
Predicted Functional Partners:
AFZ30545.1
KEGG: ana:asr2468 hypothetical protein; SPTR: Asr2468 protein.
  
     0.548
AFZ29529.1
Peptidase metallopeptidase; PFAM: Matrixin; COGs: COG5549 Zn-dependent protease; InterPro IPR006026; KEGG: npu:Npun_R4349 peptidase, metallopeptidase; SMART: Peptidase, metallopeptidase; SPTR: Peptidase, metallopeptidase.
  
     0.494
AFZ30159.1
COGs: COG5305 membrane protein; KEGG: naz:Aazo_4315 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.464
AFZ30696.1
KEGG: npu:Npun_F4003 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.434
AFZ32340.1
Hypothetical protein; KEGG: ava:Ava_3525 heterocyst differentiation protein; SPTR: Heterocyst differentiation protein.
  
     0.429
AFZ30532.1
KEGG: npu:Npun_F0821 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.419
AFZ30864.1
KEGG: ava:Ava_1602 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.413
AFZ31052.1
KEGG: ava:Ava_2307 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.408
AFZ32461.1
KEGG: npu:Npun_R5312 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.408
Your Current Organism:
Gloeocapsa sp. PCC7428
NCBI taxonomy Id: 1173026
Other names: Chroococcus sp. Cey un, G. sp. PCC 7428, Gloeocapsa sp. ATCC 29159, Gloeocapsa sp. PCC 7428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.