STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ33001.1PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Localisation of periplasmic protein complexes; TIGRFAM: TonB-dependent siderophore receptor; COGs: COG4774 Outer membrane receptor for monomeric catechols; InterPro IPR012910:IPR000531:IPR010105; KEGG: ana:all2148 ferrichrome-iron receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Ferrichrome-iron receptor; TIGRFAM: TonB-dependent siderophore receptor. (865 aa)    
Predicted Functional Partners:
AFZ33000.1
PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: ana:alr2176 iron(III) dicitrate-binding protein of ABC transporter; PFAM: Periplasmic binding protein; SPTR: Iron(III) dicitrate-binding protein of ABC transporter.
       0.550
AFZ29942.1
Outer membrane transport energization protein TonB; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: ana:all5036 hypothetical protein; PFAM: TonB, C-terminal; SPTR: All5036 protein; TIGRFAM: TonB, C-terminal; TC 2.C.1.1.1.
  
 
 0.549
AFZ29945.1
PFAM: Peptidase propeptide and YPEB domain; COGs: COG3182 Uncharacterized iron-regulated membrane protein; KEGG: npu:Npun_F3453 peptidase; SPTR: Propeptide, PepSY amd peptidase M4.
 
  
 0.535
AFZ33002.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: ana:alr7102 hypothetical protein; PFAM: Protein of unknown function DUF820; SPTR: Alr7102 protein.
       0.491
Your Current Organism:
Gloeocapsa sp. PCC7428
NCBI taxonomy Id: 1173026
Other names: Chroococcus sp. Cey un, G. sp. PCC 7428, Gloeocapsa sp. ATCC 29159, Gloeocapsa sp. PCC 7428
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