STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ17979.1Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. (299 aa)    
Predicted Functional Partners:
AFZ20389.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1802).
  
     0.603
AFZ17978.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
    0.560
AFZ19336.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase.
 
  
 0.526
AFZ17976.1
Exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family; PFAM: Glycosyl transferase WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
 
  
 0.521
AFZ17311.1
Putative membrane-anchored protein.
  
     0.464
AFZ17310.1
PFAM: Predicted membrane protein (DUF2157).
  
     0.455
AFZ17980.1
Hypothetical protein.
       0.448
AFZ16211.1
Hypothetical protein.
  
     0.419
Your Current Organism:
Microcoleus sp. PCC7113
NCBI taxonomy Id: 1173027
Other names: Allocoleopsis franciscanus PCC 7113, M. sp. PCC 7113, Microcoleus sp. PCC 7113, Oscillatoria sp. Mc
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.