STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ21362.1PFAM: Glycosyl transferase family 11. (305 aa)    
Predicted Functional Partners:
AFZ21360.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
       0.779
AFZ21361.1
Methyltransferase, FkbM family.
       0.773
AFZ21363.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Caenorhabditis protein of unknown function, DUF268.
       0.773
AFZ21364.1
Hypothetical protein.
       0.594
AFZ21357.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
       0.529
AFZ21358.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
       0.529
AFZ21359.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
       0.529
AFZ21356.1
Hypothetical protein.
       0.466
AFZ21365.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
       0.457
AFZ21366.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
       0.457
Your Current Organism:
Microcoleus sp. PCC7113
NCBI taxonomy Id: 1173027
Other names: Allocoleopsis franciscanus PCC 7113, M. sp. PCC 7113, Microcoleus sp. PCC 7113, Oscillatoria sp. Mc
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.