STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000314005_00290Unannotated protein. (1681 aa)    
Predicted Functional Partners:
GCA_000314005_02362
Unannotated protein.
 
 0.979
GCA_000314005_00060
Unannotated protein.
 
 0.978
GCA_000314005_03178
Unannotated protein.
  
 0.975
GCA_000314005_01270
Unannotated protein.
  
 0.939
GCA_000314005_00786
Unannotated protein.
 
 0.922
GCA_000314005_02809
Unannotated protein.
    
 0.920
GCA_000314005_03362
Unannotated protein.
  
 0.918
GCA_000314005_03237
Unannotated protein.
 
 0.904
GCA_000314005_03238
Unannotated protein.
 
 0.902
GCA_000314005_03861
Unannotated protein.
 
0.896
Your Current Organism:
Spirulina subsalsa
NCBI taxonomy Id: 1173029
Other names: S. subsalsa PCC 9445, Spirulina sp. PCC 9445, Spirulina subsalsa PCC 9445
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.