STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000314005_03762Unannotated protein. (423 aa)    
Predicted Functional Partners:
GCA_000314005_01955
Unannotated protein.
 
 
 0.972
GCA_000314005_01954
Unannotated protein.
 
 
 0.960
GCA_000314005_01958
Unannotated protein.
 
 
 0.946
GCA_000314005_01956
Unannotated protein.
 
  
 0.900
GCA_000314005_03761
Unannotated protein.
   
  0.805
GCA_000314005_02329
Unannotated protein.
     
 0.749
GCA_000314005_03763
Unannotated protein.
    
 0.718
GCA_000314005_01156
Unannotated protein.
   
 0.624
GCA_000314005_01157
Unannotated protein.
   
 0.624
GCA_000314005_03310
Unannotated protein.
   
 0.624
Your Current Organism:
Spirulina subsalsa
NCBI taxonomy Id: 1173029
Other names: S. subsalsa PCC 9445, Spirulina sp. PCC 9445, Spirulina subsalsa PCC 9445
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.