STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0F7RR25annotation not available (176 aa)    
Predicted Functional Partners:
A0A0F7RQD4
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.999
A0A0F7RQK0
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.999
A0A0F7RQM1
Similar to Saccharomyces cerevisiae YGL030W RPL30 Ribosomal 60S subunit protein L30.
   
 0.999
A0A0F7RQS2
annotation not available
  
 
 0.999
A0A0F7RQY1
Similar to Saccharomyces cerevisiae YDL075W RPL31A Ribosomal 60S subunit protein L31A.
   
 0.999
A0A0F7RR50
Similar to Saccharomyces cerevisiae YOR133W EFT1 Elongation factor 2 (EF-2). Partial (Partial).
  
 0.999
A0A0F7RRI9
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.999
A0A0F7RRM8
Belongs to the universal ribosomal protein uL14 family.
  
 0.999
A0A0F7RRT7
Belongs to the universal ribosomal protein uS12 family.
  
 
 0.999
A0A0F7RS18
Similar to Saccharomyces cerevisiae YJL189W RPL39 Ribosomal 60S subunit protein L39.
   
 0.999
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.