STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X2T6Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (172 aa)    
Predicted Functional Partners:
A0A0J9X2F3
annotation not available
   
 0.999
A0A0J9X4H7
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
   
 0.999
A0A0J9X4T8
Trafficking protein particle complex subunit BET3.
   
 0.999
A0A0J9X6H7
annotation not available
    
 0.999
A0A0J9X6M0
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
A0A0J9XFX8
annotation not available
   
 0.999
A0A0J9XJJ1
annotation not available
   
 0.999
A0A0J9XET5
Uncharacterized protein.
    
 0.997
A0A0J9XFZ5
Uncharacterized protein.
    
 0.996
A0A0J9X8R7
Similar to Saccharomyces cerevisiae YFL038C YPT1 Rab family GTPase.
    
 0.985
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.