STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X2W1annotation not available (378 aa)    
Predicted Functional Partners:
A0A0J9XJS5
Similar to Saccharomyces cerevisiae YGR194C XKS1 Xylulokinase.
 
    
 0.607
A0A0J9X8L4
annotation not available
  
    0.471
A0A0J9X9Q8
Similar to Saccharomyces cerevisiae YKL085W MDH1 Mitochondrial malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
    0.471
A0A0J9XHK6
Malate dehydrogenase.
  
    0.471
A0A0J9XKL8
Similar to Saccharomyces cerevisiae YDL078C MDH3 Peroxisomal malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
    0.471
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.