STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X2Z7Similar to Saccharomyces cerevisiae YMR235C RNA1 GTPase activating protein (GAP) for Gsp1p. (373 aa)    
Predicted Functional Partners:
A0A0J9X2E5
annotation not available
   
 0.999
A0A0J9X4C7
annotation not available
   
 0.995
A0A0J9XFI6
Similar to Saccharomyces cerevisiae YDR002W YRB1 Ran GTPase binding protein.
 
 
 0.979
A0A0F7RS15
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.972
A0A0J9XJ08
Belongs to the ubiquitin-conjugating enzyme family.
   
 0.964
A0A0J9YHQ5
Similar to Saccharomyces cerevisiae YDR510W SMT3 Ubiquitin-like protein of the SUMO family.
    
 0.950
A0A0J9XGB4
RanBD1 domain-containing protein.
   
 0.890
A0A0J9XK66
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.821
A0A0J9XC70
Similar to Saccharomyces cerevisiae YBL079W NUP170 Subunit of the nuclear pore complex (NPC).
   
 0.808
A0A0J9XBF6
Similar to Saccharomyces cerevisiae YGL097W SRM1 Nucleotide exchange factor for Gsp1p.
   
 
 0.805
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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