STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X3B3Similar to Saccharomyces cerevisiae YPL265W DIP5 Dicarboxylic amino acid permease. (572 aa)    
Predicted Functional Partners:
A0A0J9XGL0
Fe2OG dioxygenase domain-containing protein.
   
 0.740
ARO1
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
   
 0.537
A0A0J9X6A8
Uncharacterized protein.
    
 0.516
A0A0J9X6K3
Uncharacterized protein.
    
 0.516
A0A0J9XB32
Similar to Saccharomyces cerevisiae YGL139W FLC3 Putative FAD transporter.
    
 0.516
A0A0J9XE54
Uncharacterized protein.
    
 0.516
A0A0J9XFS3
annotation not available
    
 
 0.459
A0A0J9X8K0
RING-type domain-containing protein.
    
 0.446
A0A0J9XD40
annotation not available
    
 
 0.423
A0A0J9XEA0
annotation not available
    
 
 0.423
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.