STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X5G3annotation not available (343 aa)    
Predicted Functional Partners:
A0A0J9X567
Belongs to the AAA ATPase family.
  
 0.999
A0A0J9X6T9
annotation not available
   
 0.999
A0A0J9X8B9
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
A0A0J9X979
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.999
A0A0J9X9E3
annotation not available
   
 0.999
A0A0J9X9S2
Belongs to the AAA ATPase family.
   
 0.999
A0A0J9XA95
Ubiquitin carboxyl-terminal hydrolase.
   
 0.999
A0A0J9XB82
Belongs to the AAA ATPase family.
   
 0.999
A0A0J9XCK9
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.999
A0A0J9XFX5
annotation not available
   
 0.999
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.