STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X5L5Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1937 aa)    
Predicted Functional Partners:
A0A0J9XI08
annotation not available
   
 0.941
A0A0J9X3L8
Similar to Saccharomyces cerevisiae YBR109C CMD1 Calmodulin; Belongs to the calmodulin family.
    
 
 0.772
A0A0J9XFX4
Similar to Saccharomyces cerevisiae YBR109C CMD1 Calmodulin; Belongs to the calmodulin family.
    
 
 0.772
A0A0J9X6P3
annotation not available
   
 
 0.727
A0A0J9XHY0
Serine/threonine-protein kinase.
 
  
 0.715
A0A0J9XFX3
annotation not available
    
 
 0.683
A0A0J9XJQ4
annotation not available
 
  
 
 0.673
A0A0J9XAW5
Similar to Saccharomyces cerevisiae YNL014W HEF3 Translational elongation factor EF-3.
    
 
 0.618
A0A0J9X7C0
annotation not available
    
 
 0.617
A0A0J9XI21
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
    
 
 0.617
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.