STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X6A1Similar to Saccharomyces cerevisiae YJR132W NMD5 Karyopherin. (1118 aa)    
Predicted Functional Partners:
A0A0J9X2E5
annotation not available
   
 0.994
A0A0J9X4C7
annotation not available
   
 0.993
A0A0J9X9R2
Similar to Saccharomyces cerevisiae YOR001W RRP6 Nuclear exosome exonuclease component.
   
 0.888
A0A0J9XFI2
Similar to Saccharomyces cerevisiae YPR189W SKI3 Ski complex component and TPR protein.
   
 0.880
A0A0F7RS15
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.864
A0A0J9X889
annotation not available
   
 0.864
A0A0J9XBA5
Similar to Saccharomyces cerevisiae YDL111C RRP42 Exosome non-catalytic core component.
   
 0.864
A0A0J9XKY4
Similar to Saccharomyces cerevisiae YNL232W CSL4 Exosome non-catalytic core component.
   
 0.864
A0A0J9X5J7
Similar to Saccharomyces cerevisiae YDR280W RRP45 Exosome non-catalytic core component.
   
 0.863
A0A0J9XEX6
Similar to Saccharomyces cerevisiae YHR069C RRP4 Exosome non-catalytic core component.
   
 0.860
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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