STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X708Similar to Saccharomyces cerevisiae YNR036C MRPS12 Mitochondrial protein. (190 aa)    
Predicted Functional Partners:
A0A0J9X3Z5
annotation not available
 
 
 0.999
A0A0J9X4E9
Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.999
A0A0J9X818
Belongs to the universal ribosomal protein uS15 family.
  
 0.999
A0A0J9X8U9
Belongs to the universal ribosomal protein uS2 family.
  
 0.999
A0A0J9X990
annotation not available
  
 0.999
A0A0J9X9Q2
Belongs to the universal ribosomal protein uS5 family.
  
 0.999
A0A0J9XAL2
annotation not available
   
 
 0.999
A0A0J9XAR9
annotation not available
  
 0.999
A0A0J9XCJ9
annotation not available
 
 0.999
A0A0J9XCP5
annotation not available
  
 
 0.999
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.