STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X7B7Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (585 aa)    
Predicted Functional Partners:
A0A0J9X8R7
Similar to Saccharomyces cerevisiae YFL038C YPT1 Rab family GTPase.
    
 0.962
A0A0J9X991
annotation not available
   
 0.949
A0A0J9X6L2
annotation not available
   
 0.895
A0A0J9X993
annotation not available
   
 0.895
A0A0J9XGI8
Similar to Saccharomyces cerevisiae YML001W YPT7 Rab family GTPase.
    
 0.884
A0A0J9XI80
Similar to Saccharomyces cerevisiae YML001W YPT7 Rab family GTPase.
    
 0.884
A0A0J9X745
Similar to Saccharomyces cerevisiae YER031C YPT31 Rab family GTPase.
   
 0.880
A0A0J9XBH4
Similar to Saccharomyces cerevisiae YER031C YPT31 Rab family GTPase.
   
 0.880
A0A0J9X589
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
 0.876
A0A0J9X421
Similar to Saccharomyces cerevisiae YOR089C YPT51 Rab family GTPase.
    
 0.843
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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