STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X7R8Uncharacterized protein. (649 aa)    
Predicted Functional Partners:
A0A0J9YHA5
CENP-T_C domain-containing protein.
    
 0.914
A0A0J9X6W6
Uncharacterized protein.
    
 0.758
A0A0J9XFF1
Uncharacterized protein.
    
 0.758
A0A0J9XJA3
annotation not available
    
 0.758
A0A0J9XFZ7
annotation not available
    
 0.686
A0A0J9X622
Uncharacterized protein.
    
 0.650
A0A0J9XKX6
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.645
A0A0F7RR70
Histone H3; Belongs to the histone H3 family.
    
 0.622
A0A0J9XC21
Similar to Saccharomyces cerevisiae YBR010W HHT1 Histone H3.
    
 0.622
A0A0J9XIW5
annotation not available
    
 
 0.618
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.