STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X8Q4Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family. (411 aa)    
Predicted Functional Partners:
A0A0F7RQR5
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.999
A0A0J9XFR0
TPR_REGION domain-containing protein.
   
 
 0.992
A0A0J9X7C5
annotation not available
   
 0.970
A0A0J9XJY4
annotation not available
   
 0.970
A0A0F7RR70
Histone H3; Belongs to the histone H3 family.
    
 0.967
A0A0J9XC21
Similar to Saccharomyces cerevisiae YBR010W HHT1 Histone H3.
    
 0.958
A0A0J9X9C6
annotation not available
   
 0.953
A0A0J9XJJ3
Similar to Saccharomyces cerevisiae YLL004W ORC3 Subunit of the origin recognition complex.
   
 
 0.950
A0A0J9XK87
Similar to Saccharomyces cerevisiae YNL261W ORC5 Subunit of the origin recognition complex.
    
 
 0.947
A0A0J9X9T2
Similar to Saccharomyces cerevisiae YBR060C ORC2 Subunit of the origin recognition complex.
   
 
 0.938
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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