A0A0J9X992 protein (Geotrichum candidum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0J9X992

Uncharacterized protein. (1142 aa)

Predicted Functional Partners:

A0A0J9XHN2

0.808

A0A0J9YHD8

0.808

A0A0J9X697

0.779

A0A0J9XFP2

0.710

A0A0J9XG90

0.710

A0A0J9XC40

0.708

A0A0J9X348

0.696

A0A0J9XAP8

0.696

A0A0J9XHN8

0.691

A0A0J9YHE0

0.691

Your Current Organism:

Geotrichum candidum

NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0J9X348	A0A0J9X992	Uncharacterized protein.	Uncharacterized protein.	0.696
A0A0J9X348	A0A0J9XC40	Uncharacterized protein.	Similar to Saccharomyces cerevisiae YGR233C PHO81 Cyclin-dependent kinase (CDK) inhibitor.	0.884
A0A0J9X348	A0A0J9XFP2	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.816
A0A0J9X348	A0A0J9XG90	Uncharacterized protein.	annotation not available	0.816
A0A0J9X348	A0A0J9XHN2	Uncharacterized protein.	Similar to Saccharomyces cerevisiae YPL110C GDE1 Glycerophosphocholine (GroPCho) phosphodiesterase.	0.770
A0A0J9X348	A0A0J9YHD8	Uncharacterized protein.	Similar to Saccharomyces cerevisiae YPL110C GDE1 Glycerophosphocholine (GroPCho) phosphodiesterase.	0.770
A0A0J9X697	A0A0J9X992	Uncharacterized protein.	Uncharacterized protein.	0.779
A0A0J9X697	A0A0J9XC40	Uncharacterized protein.	Similar to Saccharomyces cerevisiae YGR233C PHO81 Cyclin-dependent kinase (CDK) inhibitor.	0.938
A0A0J9X697	A0A0J9XHN2	Uncharacterized protein.	Similar to Saccharomyces cerevisiae YPL110C GDE1 Glycerophosphocholine (GroPCho) phosphodiesterase.	0.942
A0A0J9X697	A0A0J9YHD8	Uncharacterized protein.	Similar to Saccharomyces cerevisiae YPL110C GDE1 Glycerophosphocholine (GroPCho) phosphodiesterase.	0.942
A0A0J9X992	A0A0J9X348	Uncharacterized protein.	Uncharacterized protein.	0.696
A0A0J9X992	A0A0J9X697	Uncharacterized protein.	Uncharacterized protein.	0.779
A0A0J9X992	A0A0J9XAP8	Uncharacterized protein.	Uncharacterized protein.	0.696
A0A0J9X992	A0A0J9XC40	Uncharacterized protein.	Similar to Saccharomyces cerevisiae YGR233C PHO81 Cyclin-dependent kinase (CDK) inhibitor.	0.708
A0A0J9X992	A0A0J9XFP2	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.710
A0A0J9X992	A0A0J9XG90	Uncharacterized protein.	annotation not available	0.710
A0A0J9X992	A0A0J9XHN2	Uncharacterized protein.	Similar to Saccharomyces cerevisiae YPL110C GDE1 Glycerophosphocholine (GroPCho) phosphodiesterase.	0.808
A0A0J9X992	A0A0J9XHN8	Uncharacterized protein.	annotation not available	0.691
A0A0J9X992	A0A0J9YHD8	Uncharacterized protein.	Similar to Saccharomyces cerevisiae YPL110C GDE1 Glycerophosphocholine (GroPCho) phosphodiesterase.	0.808
A0A0J9X992	A0A0J9YHE0	Uncharacterized protein.	annotation not available	0.691

page 1 of 4

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About