STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X9H1annotation not available (464 aa)    
Predicted Functional Partners:
A0A0J9XHK4
Belongs to the AAA ATPase family.
    
 
 0.945
A0A0J9XK12
Belongs to the AAA ATPase family.
   
 
 0.903
A0A0J9XIE4
Belongs to the AAA ATPase family.
   
 
 0.892
A0A0J9X9S2
Belongs to the AAA ATPase family.
    
 
 0.873
A0A0J9XBH2
annotation not available
   
 
 0.833
A0A0J9XB82
Belongs to the AAA ATPase family.
    
 
 0.830
A0A0J9X8B9
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 
 0.815
A0A0J9X479
annotation not available
    
 
 0.811
A0A0J9XFX5
annotation not available
    
 
 0.741
A0A0J9X567
Belongs to the AAA ATPase family.
   
 
 0.740
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.