STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X9P1Aspartokinase. (511 aa)    
Predicted Functional Partners:
A0A0J9X4Y8
Similar to Saccharomyces cerevisiae YJR139C HOM6 Homoserine dehydrogenase.
 0.985
A0A0J9XJF3
Homoserine dehydrogenase.
 0.985
A0A0J9XBW1
Similar to Saccharomyces cerevisiae YDR158W HOM2 Aspartic beta semi-aldehyde dehydrogenase.
 
 0.979
A0A0J9XGF5
Tryptophan synthase.
  
 
 0.954
A0A0J9X7D2
Histidine biosynthesis trifunctional protein.
  
  
 0.948
A0A0J9X8T6
annotation not available
  
 0.938
A0A0J9XA92
Similar to Saccharomyces cerevisiae YCR053W THR4 Threonine synthase.
  
 0.934
A0A0J9XBW4
annotation not available
  
 
 0.896
A0A0J9XK18
Similar to Saccharomyces cerevisiae YNL277W MET2 L-homoserine-O-acetyltransferase.
 
 
 
 0.856
A0A0J9X346
Hcy-binding domain-containing protein.
  
 
 0.830
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.