STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XA82annotation not available (272 aa)    
Predicted Functional Partners:
A0A0J9XBA3
Similar to Saccharomyces cerevisiae YOL115W PAP2 Non-canonical poly(A) polymerase.
   
 
 0.674
A0A0J9X6C1
annotation not available
   
 
 0.636
A0A0J9XDR5
annotation not available
   
 
 0.636
A0A0J9X6Z5
Belongs to the universal ribosomal protein uL16 family.
   
  0.620
A0A0J9X4M5
annotation not available
   
   0.584
A0A0J9XCK5
annotation not available
   
  0.541
A0A0J9XD06
annotation not available
   
  0.541
A0A0J9XIK3
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.511
A0A0J9XJM0
Protein MAK16; Belongs to the MAK16 family.
   
   0.485
A0A0J9XAW5
Similar to Saccharomyces cerevisiae YNL014W HEF3 Translational elongation factor EF-3.
    
   0.479
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.