STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XAB1Similar to Saccharomyces cerevisiae YGR218W CRM1 Major karyopherin. (1081 aa)    
Predicted Functional Partners:
A0A0F7RS15
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.973
A0A0J9XCY5
Similar to Saccharomyces cerevisiae YIL115C NUP159 Nucleoporin, subunit of the nuclear pore complex.
    
 0.973
A0A0J9XFI6
Similar to Saccharomyces cerevisiae YDR002W YRB1 Ran GTPase binding protein.
   
 
 0.923
A0A0J9XGB4
RanBD1 domain-containing protein.
    
 
 0.903
A0A0J9X2E5
annotation not available
   
 
 0.887
A0A0J9XCI3
annotation not available
    
 
 0.876
A0A0J9X4K2
annotation not available
    
 0.755
A0A0J9X693
annotation not available
    
 0.755
NUP116
Nup82 subcomplex subunit.
    
 0.755
A0A0J9X4C7
annotation not available
   
 
 0.743
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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