STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XC05annotation not available (777 aa)    
Predicted Functional Partners:
A0A0J9XAE2
annotation not available
   
 0.994
A0A0J9XDM6
Belongs to the STXBP/unc-18/SEC1 family.
   
 0.988
A0A0J9XE62
annotation not available
   
 0.956
A0A0J9XB69
Belongs to the synaptobrevin family.
    
 0.955
A0A0J9X2H2
annotation not available
    
 0.946
A0A0J9X6S9
annotation not available
    
 0.946
A0A0J9X2M3
Similar to Saccharomyces cerevisiae YLR268W SEC22 R-SNARE protein; Belongs to the synaptobrevin family.
    
 0.942
A0A0J9XH68
annotation not available
   
 
 0.936
A0A0J9X804
annotation not available
    
 0.929
A0A0J9X541
Similar to Saccharomyces cerevisiae YMR197C VTI1 Protein involved in cis-Golgi membrane traffic.
   
 0.928
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.