STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XC60TMF_TATA_bd domain-containing protein. (1025 aa)    
Predicted Functional Partners:
A0A0J9X991
annotation not available
    
 0.797
A0A0J9X2E5
annotation not available
   
 0.692
A0A0J9XFI6
Similar to Saccharomyces cerevisiae YDR002W YRB1 Ran GTPase binding protein.
   
 0.684
A0A0J9XGB4
RanBD1 domain-containing protein.
   
 0.684
A0A0J9X3K9
annotation not available
     
 0.666
A0A0J9X382
annotation not available
   
 
 0.664
A0A0J9XC98
annotation not available
     
 0.664
A0A0J9X5S2
annotation not available
   
 
 0.655
A0A0J9X9W4
annotation not available
     
 0.654
A0A0J9XGB9
Uncharacterized protein.
     
 0.646
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.