STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XC98annotation not available (258 aa)    
Predicted Functional Partners:
A0A0J9XBY9
Belongs to the universal ribosomal protein uS11 family.
    
 0.999
A0A0J9XK56
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.999
A0A0F7RSP7
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.998
A0A0J9X611
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
  0.998
A0A0J9X732
annotation not available
   
 
 0.998
A0A0J9X853
Similar to Saccharomyces cerevisiae YKL143W LTV1 Component of the GSE complex.
   
 0.998
A0A0J9X9M3
Belongs to the universal ribosomal protein uS5 family.
   
 0.998
A0A0J9XDP6
annotation not available
   
 0.998
A0A0J9XB27
annotation not available
   
 
 0.997
A0A0J9XE99
annotation not available
   
 
 0.995
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.