STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XCA7Similar to Saccharomyces cerevisiae YGR003W CUL3 Ubiquitin-protein ligase; Belongs to the cullin family. (808 aa)    
Predicted Functional Partners:
A0A0J9YHI5
annotation not available
    
 0.986
A0A0J9XGC3
TIP120 domain-containing protein.
   
 0.980
A0A0J9XD14
Similar to Saccharomyces cerevisiae YDR030C RAD28 Protein involved in DNA repair.
    
 0.979
A0A0J9XF65
annotation not available
    
 0.977
A0A0J9XHZ3
annotation not available
    
 0.946
A0A0J9XLP1
annotation not available
    
 0.932
A0A0J9XHM0
PCI domain-containing protein.
   
 0.926
A0A0J9X8K7
MPN domain-containing protein.
    
 0.925
A0A0J9X326
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
 0.900
A0A0J9XI28
PCI domain-containing protein.
    
 0.899
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.