STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XCR4E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1884 aa)    
Predicted Functional Partners:
A0A0J9XEC1
Similar to Saccharomyces cerevisiae YGL058W RAD6 Ubiquitin-conjugating enzyme (E2); Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.912
A0A0J9X2U5
annotation not available
   
 0.843
A0A0J9XEP0
annotation not available
   
 0.789
A0A0J9X3J4
annotation not available
   
 0.713
A0A0J9X6Q9
annotation not available
   
 0.706
A0A0F7RSR8
annotation not available
    
  0.684
A0A0J9XBX4
annotation not available
    
  0.684
A0A0J9XJY3
annotation not available
    
 
 0.642
A0A0J9XHM9
Similar to Saccharomyces cerevisiae YMR247C RKR1 RING domain E3 ubiquitin ligase.
   
 0.638
A0A0J9X2M5
annotation not available
    
 
 0.631
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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