STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XD13rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (327 aa)    
Predicted Functional Partners:
A0A0J9XF04
annotation not available
   
 
 0.986
A0A0J9X428
Similar to Saccharomyces cerevisiae YNL075W IMP4 Component of the SSU processome.
   
   0.971
A0A0J9XB27
annotation not available
   
 
 0.969
A0A0J9XJE3
annotation not available
   
   0.959
A0A0J9XEX1
annotation not available
   
   0.956
A0A0J9X889
annotation not available
   
   0.953
A0A0J9X853
Similar to Saccharomyces cerevisiae YKL143W LTV1 Component of the GSE complex.
   
   0.946
A0A0J9XBF4
Similar to Saccharomyces cerevisiae YBR247C ENP1 Protein associated with U3 and U14 snoRNAs.
   
 
 0.940
A0A0J9YHI7
Similar to Saccharomyces cerevisiae YBR247C ENP1 Protein associated with U3 and U14 snoRNAs.
   
 
 0.940
A0A0J9X7K3
annotation not available
   
   0.939
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.