STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XDQ1annotation not available (417 aa)    
Predicted Functional Partners:
A0A0J9XIK7
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
     
 0.874
A0A0J9X9Y3
Metallophos domain-containing protein.
     
 0.825
A0A0J9XGR9
annotation not available
     
 0.791
A0A0J9XH35
Similar to Saccharomyces cerevisiae YPL087W YDC1 Alkaline dihydroceramidase.
    
 0.786
A0A0J9YHF1
Similar to Saccharomyces cerevisiae YPL087W YDC1 Alkaline dihydroceramidase.
    
 0.786
A0A0J9XC49
Uncharacterized protein.
     
 0.769
A0A0J9XI18
Uncharacterized protein.
     
 0.769
A0A0J9XAK8
Similar to Saccharomyces cerevisiae YDR400W URH1 Uridine nucleosidase.
 
      0.746
A0A0J9XA23
annotation not available
    
 0.726
A0A0J9YHG5
Similar to Saccharomyces cerevisiae YKR053C YSR3 Dihydrosphingosine 1-phosphate phosphatase.
    
 0.726
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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