STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XEC1Similar to Saccharomyces cerevisiae YGL058W RAD6 Ubiquitin-conjugating enzyme (E2); Belongs to the ubiquitin-conjugating enzyme family. (174 aa)    
Predicted Functional Partners:
A0A0J9XIQ8
Similar to Saccharomyces cerevisiae YCR066W RAD18 E3 ubiqutin ligase.
    
 0.997
A0A0J9XJT4
E3 ubiquitin protein ligase.
    
 0.997
A0A0J9X3V6
Similar to Saccharomyces cerevisiae YKL210W UBA1 Ubiquitin activating enzyme (E1); Belongs to the ubiquitin-activating E1 family.
   
 0.983
A0A0J9X2U5
annotation not available
   
 0.969
A0A0J9X6Q9
annotation not available
    
 0.965
A0A0J9X6D9
annotation not available
   
0.931
A0A0J9XCR4
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.912
A0A0J9XJS4
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.912
A0A0J9X3J4
annotation not available
    
 0.910
A0A0J9YHQ5
Similar to Saccharomyces cerevisiae YDR510W SMT3 Ubiquitin-like protein of the SUMO family.
   
 0.900
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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