STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XEC2Methyltransf_11 domain-containing protein. (265 aa)    
Predicted Functional Partners:
A0A0J9X639
annotation not available
   
 0.745
A0A0J9XF04
annotation not available
   
  0.715
A0A0J9X9M3
Belongs to the universal ribosomal protein uS5 family.
    
 0.699
A0A0J9X9Q2
Belongs to the universal ribosomal protein uS5 family.
    
 0.699
A0A0F7RQR5
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.698
A0A0F7RQK0
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.696
A0A0F7RQA3
40S ribosomal protein S27.
    
  0.693
A0A0F7RQD4
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.688
A0A0F7RSP7
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.688
A0A0J9X611
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.688
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.