STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XEJ7annotation not available (161 aa)    
Predicted Functional Partners:
A0A0J9XAL2
annotation not available
   
 
 0.995
A0A0J9XIK0
annotation not available
   
 
 0.995
A0A0J9XCP5
annotation not available
   
   0.994
A0A0J9XEY0
annotation not available
   
 
 0.994
A0A0J9XKN7
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.994
A0A0J9X5W2
annotation not available
   
 
 0.993
A0A0J9XLD6
annotation not available
   
 
 0.993
A0A0J9X2U0
annotation not available
   
   0.992
A0A0J9X4E9
Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.992
A0A0J9X990
annotation not available
   
 
 0.991
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.