STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XEX6Similar to Saccharomyces cerevisiae YHR069C RRP4 Exosome non-catalytic core component. (331 aa)    
Predicted Functional Partners:
A0A0J9X5J7
Similar to Saccharomyces cerevisiae YDR280W RRP45 Exosome non-catalytic core component.
   
 0.999
A0A0J9X875
Similar to Saccharomyces cerevisiae YOL142W RRP40 Exosome non-catalytic core component.
   
 0.999
A0A0J9X8C7
Similar to Saccharomyces cerevisiae YGR095C RRP46 Exosome non-catalytic core component.
   
 0.999
A0A0J9X8Z9
annotation not available
   
 0.999
A0A0J9X9R2
Similar to Saccharomyces cerevisiae YOR001W RRP6 Nuclear exosome exonuclease component.
   
 0.999
A0A0J9XBA5
Similar to Saccharomyces cerevisiae YDL111C RRP42 Exosome non-catalytic core component.
   
 0.999
A0A0J9XCA1
Similar to Saccharomyces cerevisiae YGR195W SKI6 Exosome non-catalytic core component.
 
 
 0.999
A0A0J9XKY4
Similar to Saccharomyces cerevisiae YNL232W CSL4 Exosome non-catalytic core component.
   
 0.999
A0A0J9X908
annotation not available
   
 0.998
A0A0J9X9Z7
Similar to Saccharomyces cerevisiae YGR158C MTR3 Exosome non-catalytic core component.
   
 0.998
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.