STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XHN9Uncharacterized protein. (1305 aa)    
Predicted Functional Partners:
A0A0J9XFI2
Similar to Saccharomyces cerevisiae YPR189W SKI3 Ski complex component and TPR protein.
    
 0.861
A0A0J9XI75
Similar to Saccharomyces cerevisiae YLR398C SKI2 Ski complex component and putative RNA helicase.
    
 0.854
A0A0J9XCS6
Similar to Saccharomyces cerevisiae YLR418C CDC73 Component of the Paf1p complex.
    
 0.834
A0A0J9XDB3
annotation not available
   
 0.817
A0A0J9X3E4
Similar to Saccharomyces cerevisiae YOR123C LEO1 Component of the Paf1 complex.
    
 0.802
A0A0J9XET4
Similar to Saccharomyces cerevisiae YOL145C CTR9 Component of the Paf1p complex.
    
 0.794
A0A0J9XHA7
Uncharacterized protein.
   
 0.721
A0A0J9XCA7
Similar to Saccharomyces cerevisiae YGR003W CUL3 Ubiquitin-protein ligase; Belongs to the cullin family.
    
  0.719
A0A0J9YHI5
annotation not available
    
 0.717
A0A0J9X445
Similar to Saccharomyces cerevisiae YJR048W CYC1 Cytochrome c, isoform 1; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.713
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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