STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XIK3KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (340 aa)    
Predicted Functional Partners:
A0A0F7RSP7
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.999
A0A0J9X3R0
annotation not available
   
 0.999
A0A0J9X3U9
annotation not available
   
 0.999
A0A0J9X4Q2
annotation not available
   
 0.999
A0A0J9X611
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
  0.999
A0A0J9X726
Similar to Saccharomyces cerevisiae YGL171W ROK1 ATP-dependent RNA helicase of the DEAD box family; Belongs to the DEAD box helicase family.
   
 0.999
A0A0J9X7K3
annotation not available
   
 0.999
A0A0J9X8W6
annotation not available
   
 0.999
A0A0J9X9A0
annotation not available
   
 0.999
A0A0J9XAV5
Similar to Saccharomyces cerevisiae YHR148W IMP3 Component of the SSU processome.
   
 0.999
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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