STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XIP0Similar to Saccharomyces cerevisiae YLR148W PEP3 Component of CORVET tethering complex. (1011 aa)    
Predicted Functional Partners:
A0A0J9XH85
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
   
 0.998
A0A0J9XI93
Belongs to the STXBP/unc-18/SEC1 family.
   
 0.998
A0A0J9YH84
E3 ubiquitin-protein ligase PEP5.
   
 0.998
A0A0J9X5J0
Similar to Saccharomyces cerevisiae YDR495C VPS3 Component of CORVET tethering complex.
   
 0.997
A0A0J9XJB3
annotation not available
   
 0.997
A0A0J9XFM3
annotation not available
   
 0.974
A0A0J9X3A0
annotation not available
    
 0.973
A0A0J9X3F7
Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.
    
 0.973
A0A0J9X541
Similar to Saccharomyces cerevisiae YMR197C VTI1 Protein involved in cis-Golgi membrane traffic.
    
 
 0.973
A0A0J9X7S0
Uncharacterized protein.
    
 
 0.966
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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