STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XJ29Uncharacterized protein. (955 aa)    
Predicted Functional Partners:
A0A0J9XGK9
Uncharacterized protein.
   
 0.717
A0A0J9X9G2
Similar to Saccharomyces cerevisiae YDR328C SKP1 Evolutionarily conserved kinetochore protein; Belongs to the SKP1 family.
    
  0.588
A0A0J9XAR3
Uncharacterized protein.
    
 0.586
A0A0J9X9E3
annotation not available
    
  0.580
A0A0J9X9M4
annotation not available
    
 0.555
A0A0J9X5I7
annotation not available
    
  0.548
A0A0J9YHQ5
Similar to Saccharomyces cerevisiae YDR510W SMT3 Ubiquitin-like protein of the SUMO family.
    
 0.544
A0A0J9X2L7
Similar to Saccharomyces cerevisiae YNR026C SEC12 Guanine nucleotide exchange factor (GEF).
    
  0.539
A0A0J9XCQ1
Similar to Saccharomyces cerevisiae YLR324W PEX30 Peroxisomal integral membrane protein.
    
 0.537
A0A0J9XCW4
Similar to Saccharomyces cerevisiae YLR324W PEX30 Peroxisomal integral membrane protein.
    
 0.537
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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